Hematlas data

Overview of the internal Hematlas project: what was sequenced, for which patient and sample.

Sequencing Databank

One row per patient case, one card per assay family: see at a glance what was sequenced and what is missing. Click CUT&RUN / CUT&Tag for the targets.

Live Sequencing Submissions

Register a shipment from any sample table or facility form, new bench experiments included, then follow every sample: sent, passed QC, sequenced, files in the databank, processed.

Live Atlas Viewer

Browse the sequencing databank across assays, cases and sample metadata.

Live

Omics results

Explore the analysed results: expression, variants, fusions and copy number, per sample and across the cohort.

RNA Hematlas

Explore RNA expression and hematopoietic reference data.Still usable.

Not up to date Exome

Review exome analysis results and variant-level summaries.

 Fusions

Inspect gene fusion calls and supporting analysis outputs.

 CNV

Browse copy number variation calls across samples and chromosomes.

 Cohort Explorer

Copy-number heatmap and mutation landscape across all AML samples at once, side by side with clinical metadata. Sort, filter and group by any attribute; bookmark and share views.Currently loaded with a synthetic demonstration cohort.

Demo

Tools

Work with your own files: genome tracks, graphs and statistics, flow cytometry.

Genome Browser

Load your bigWig, BAM, BED or VCF files, browse ENCODE and UCSC annotation tracks, and export figures. Files stay in your browser.

 LRGraph

Data tables, statistics and publication-ready graphs in the browser, like GraphPad Prism. Opens Prism files.

New · Beta LRPaper

Write papers together with tracked changes, figure alternatives, references and Word export. Early look: test data only, please.

Early look · Beta LRFlow

Gate flow cytometry data in the browser and apply strategies to whole cohorts. Opens FCS, LMD and Kaluza files. Research use only.

New · Beta LRFigure

Figure Builder for schematics, like BioRender: drag free scientific icons and pictures onto a page, add labels and arrows, export SVG, PDF, PNG, TIFF or PowerPoint with the credit line.

New · Beta